Mass Spectrometry

No description specified

SEEK ID: https://sandbox1.datahub.vib.be/templates/10

Submitter: System

Projects: Default Project

Version: 1.0.0

Group: MetaboLights

2 Sample types are referencing this Experiment Sample Template

ISA Level: assay - data file

Organism: any

Parent Template: None

Child Templates:

Attributes

Name	Type	Description	PID	ISA Tag	Unit
Input*	Registered Sample List - /templates/10	Existing Samples in DataHub that represent input for this protocol.	-	-	-
MS Assay Name*	String	User-defined name for a MS assay.	-	data_file	-
MS protocol	String	Protocol, describing the settings the Mass Analyzers for acquisition.	-	protocol	-
Scan polarity	Controlled Vocabulary - Scan polarity	An acquisition mode to which specifies weather polarity is negative, positive or alternating.	-	parameter_value	-
Scan m/z range	String	The limit of m/z over which a mass spectrometer can detect ions. e.g 200-1000	-	parameter_value	-
Instument	Controlled Vocabulary - Instument	the name of the mass spectrometry instrument, manufacturer, model # operational software name operational software version	-	parameter_value	-
Ion source	Controlled Vocabulary - Ion source	The type of ion source used in the mass spectrometry instrument.	-	parameter_value	-
Mass Analyzer	String	The type of mass analyzers used in the mass spectrometry instrument. E.g. Quadrupole, Time-of-Flight, Orbitrap, Ion Trap	-	parameter_value	-
Raw Spectral Data File*	String	Name (or URI) of the raw spectral data file generated by an assay.	-	data_file_comment	-

(v.1.15.2)